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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106564207Multivesicular body subunit 12A-like isoform X1. (286 aa)    
Predicted Functional Partners:
LOC106585126
Vacuolar protein sorting-associated protein 37B-like.
   
 0.985
vp37b
Vacuolar protein sorting-associated protein 37B.
   
 0.985
LOC106588905
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.983
vps28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.983
ENSSSAP00000010379
annotation not available
    
 0.974
tsg101
Tumor susceptibility gene 101 protein.
    
 0.974
LOC106562990
Vacuolar protein sorting-associated protein 37B-like.
   
 0.957
LOC106568542
Vacuolar protein sorting-associated protein 37B-like.
   
 0.957
VP37A
Vacuolar protein sorting-associated protein 37A.
   
 0.951
LOC106579894
Multivesicular body subunit 12B-like.
    
0.948
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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