STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106605766Leukocyte receptor cluster member 9-like. (583 aa)    
Predicted Functional Partners:
rs14
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.673
LOC106611871
HLA class II histocompatibility antigen gamma chain-like.
   
 0.673
LOC100194652
Salmo salar ribosomal protein S14-2 (LOC100194652), mRNA.
   
 0.673
mrps11
28S ribosomal protein S11, mitochondrial isoform X1; Belongs to the universal ribosomal protein uS11 family.
   
 0.633
fbxw8
F-box/WD repeat-containing protein 8 isoform X2.
      
 0.574
depdc5
DEP domain-containing protein 5 isoform X4.
      
 0.511
pop5
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
  
 0.470
LOC106605761
Leukocyte receptor cluster member 8 homolog.
      
 0.429
LOC106577165
Leukocyte receptor cluster member 8 homolog.
      
 0.429
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.