STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
catsperdCation channel sperm-associated protein subunit delta isoform X1. (761 aa)    
Predicted Functional Partners:
catsperb
Cation channel sperm-associated protein subunit beta isoform X1.
  
 
 0.998
LOC106603651
Cation channel sperm-associated protein subunit gamma-like.
  
 0.995
CATSPER2
Cation channel sperm-associated protein 2 isoform X2.
  
 
 0.995
pcbd2
Cation channel sperm-associated protein 3 isoform X1.
    
 0.994
LOC106563455
Cation channel sperm-associated protein 1-like isoform X1.
    
 0.985
catsper4
Cation channel sperm-associated protein 4.
    
 0.911
catspere
Uncharacterized protein C1orf101 homolog isoform X1.
  
 
0.888
efcab9
EF-hand calcium-binding domain-containing protein 9 isoform X1.
  
 
 
 0.858
ENSSSAP00000034674
annotation not available
  
 
 
 0.856
ENSSSAP00000003752
annotation not available
   
 0.845
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.