Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
jos2Josephin-2-like. (183 aa)    
Predicted Functional Partners:
LOC106562992
polyubiquitin-B.
    
 0.800
LOC100194654
Salmo salar ribosomal protein S27-3 (LOC100194654), mRNA.
    
  0.768
LOC106577118
ubiquitin-40S ribosomal protein S27a.
    
  0.768
ENSSSAP00000019398
annotation not available
    
  0.680
LOC106599031
Ubiquitin A-52 residue ribosomal protein fusion product 1like 2.
    
  0.680
ENSSSAP00000071551
annotation not available
    
  0.680
LOC100136537
Ubiquitin A-52 residue ribosomal protein fusion product 1like 1.
    
  0.680
LOC100194659
Salmo salar ubiquitin A-52 residue ribosomal protein fusion product 1like 2 (LOC100194659), mRNA.
    
  0.680
LOC106599031-2
ubiquitin-60S ribosomal protein L40-like.
    
  0.680
tysnd1
Peroxisomal leader peptide-processing protease.
    
   0.628
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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