ENSSSAP00000010071 protein (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSSSAP00000010071

annotation not available (205 aa)

Predicted Functional Partners:

LOC106572808

0.997

LOC106575707

0.963

LOC106565992

0.963

LOC106582620

0.963

ENSSSAP00000100253

0.963

LOC106574253

0.946

LOC106574253-2

0.946

LOC106574253-3

0.946

LOC106574253-4

0.946

LOC106598387

0.946

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000010071	ENSSSAP00000100253	ENSSSAP00000010071	ENSSSAP00000100253	annotation not available	Tumor necrosis factor receptor superfamily member 5-like.	0.963
ENSSSAP00000010071	LOC106565992	ENSSSAP00000010071	ENSSSAP00000038130	annotation not available	Tumor necrosis factor receptor superfamily member 9-like isoform X1.	0.963
ENSSSAP00000010071	LOC106572808	ENSSSAP00000010071	ENSSSAP00000068508	annotation not available	Tumor necrosis factor receptor superfamily member 14-like isoform X1.	0.997
ENSSSAP00000010071	LOC106574253	ENSSSAP00000010071	ENSSSAP00000005967	annotation not available	Tumor necrosis factor receptor superfamily member 11B-like.	0.946
ENSSSAP00000010071	LOC106574253-2	ENSSSAP00000010071	ENSSSAP00000021556	annotation not available	Tumor necrosis factor receptor superfamily member 11B-like.	0.946
ENSSSAP00000010071	LOC106574253-3	ENSSSAP00000010071	ENSSSAP00000022368	annotation not available	Tumor necrosis factor receptor superfamily member 11B-like.	0.946
ENSSSAP00000010071	LOC106574253-4	ENSSSAP00000010071	ENSSSAP00000024454	annotation not available	Tumor necrosis factor receptor superfamily member 11B-like.	0.946
ENSSSAP00000010071	LOC106575707	ENSSSAP00000010071	ENSSSAP00000031531	annotation not available	Tumor necrosis factor receptor superfamily member 5-like.	0.963
ENSSSAP00000010071	LOC106582620	ENSSSAP00000010071	ENSSSAP00000084830	annotation not available	Tumor necrosis factor receptor superfamily member 5-like.	0.963
ENSSSAP00000010071	LOC106598387	ENSSSAP00000010071	ENSSSAP00000026468	annotation not available	Tumor necrosis factor receptor superfamily member 11B-like.	0.946
ENSSSAP00000100253	ENSSSAP00000010071	ENSSSAP00000100253	ENSSSAP00000010071	Tumor necrosis factor receptor superfamily member 5-like.	annotation not available	0.963
LOC106565992	ENSSSAP00000010071	ENSSSAP00000038130	ENSSSAP00000010071	Tumor necrosis factor receptor superfamily member 9-like isoform X1.	annotation not available	0.963
LOC106565992	LOC106575707	ENSSSAP00000038130	ENSSSAP00000031531	Tumor necrosis factor receptor superfamily member 9-like isoform X1.	Tumor necrosis factor receptor superfamily member 5-like.	0.567
LOC106565992	LOC106582620	ENSSSAP00000038130	ENSSSAP00000084830	Tumor necrosis factor receptor superfamily member 9-like isoform X1.	Tumor necrosis factor receptor superfamily member 5-like.	0.545
LOC106572808	ENSSSAP00000010071	ENSSSAP00000068508	ENSSSAP00000010071	Tumor necrosis factor receptor superfamily member 14-like isoform X1.	annotation not available	0.997
LOC106574253	ENSSSAP00000010071	ENSSSAP00000005967	ENSSSAP00000010071	Tumor necrosis factor receptor superfamily member 11B-like.	annotation not available	0.946
LOC106574253-2	ENSSSAP00000010071	ENSSSAP00000021556	ENSSSAP00000010071	Tumor necrosis factor receptor superfamily member 11B-like.	annotation not available	0.946
LOC106574253-3	ENSSSAP00000010071	ENSSSAP00000022368	ENSSSAP00000010071	Tumor necrosis factor receptor superfamily member 11B-like.	annotation not available	0.946
LOC106574253-4	ENSSSAP00000010071	ENSSSAP00000024454	ENSSSAP00000010071	Tumor necrosis factor receptor superfamily member 11B-like.	annotation not available	0.946
LOC106575707	ENSSSAP00000010071	ENSSSAP00000031531	ENSSSAP00000010071	Tumor necrosis factor receptor superfamily member 5-like.	annotation not available	0.963