STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wt1Wilms tumor protein isoform X1. (486 aa)    
Predicted Functional Partners:
LOC106586722
Nuclear receptor subfamily 0 group B member 1-like.
    
 0.741
LOC106560889
Uncharacterized protein LOC106560889.
    
 0.730
foxf1
Forkhead box protein F1.
    
 0.710
LOC106576316
PRKC apoptosis WT1 regulator protein-like isoform X1.
    
 
 0.672
NR0B1
Nuclear receptor subfamily 0 group B member 1-like.
    
 0.670
NR5A1
Steroidogenic factor 1-like.
    
 0.662
NR5A1-2
Nuclear receptor subfamily 5 group A member 2-like isoform X1.
    
 0.662
NR5A1-3
Nuclear receptor subfamily 5 group A member 2-like isoform X1.
    
 0.662
LOC106583123
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
      
 0.641
LOC106606426
Transcription factor Sox-9-A-like isoform X1.
    
 0.624
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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