STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106603090Radial spoke head protein 6 homolog A-like. (526 aa)    
Predicted Functional Partners:
rsph9
Radial spoke head protein 9 homolog.
  
 0.967
rsph1
Radial spoke head 1 homolog.
   
 
 0.961
ENSSSAP00000057057
Radial spoke head component 9.
   
 
 0.939
NUP214
Nuclear pore complex protein Nup214-like isoform X2.
    
 0.925
ENSSSAP00000025737
annotation not available
   
 
 0.919
LOC106582182
E3 SUMO-protein ligase RanBP2-like isoform X4.
   
 
 0.919
LOC106586530
E3 SUMO-protein ligase RanBP2-like isoform X1.
   
 
 0.919
ENSSSAP00000077141
annotation not available
   
 
 0.919
ENSSSAP00000077162
annotation not available
   
 
 0.919
ENSSSAP00000077168
annotation not available
   
 
 0.919
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.