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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000010087annotation not available (477 aa)    
Predicted Functional Partners:
LOC106594845
Protein unc-93 homolog B1-like.
    
 0.895
myd88
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
   
 0.829
LOC106592035
TNF receptor-associated factor 6-like.
   
 0.710
LOC106562692
TNF receptor-associated factor 6-like.
   
 0.710
CSF1R-3
Macrophage colony-stimulating factor 1 receptor 1-like isoform X1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
 0.655
CSF1R-4
Macrophage colony stimulating factor receptor-like protein isoform X2; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
 0.655
LOC100286690
Tyrosine-protein kinase.
   
 0.651
jak1
Tyrosine-protein kinase.
   
 0.647
LOC106608489
L-rhamnose-binding lectin CSL1 isoform X2.
   
   0.644
LOC106605779
L-rhamnose-binding lectin CSL2-like.
   
   0.644
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.