Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rhbl4Rhomboid-like protease 4 isoform X2. (900 aa)    
Predicted Functional Partners:
LOC106610723
Disintegrin and metalloproteinase domain-containing protein 17-like isoform X1.
    
 0.883
ADAM17
Disintegrin and metalloproteinase domain-containing protein 17-like isoform X1.
    
 0.883
ENSSSAP00000080462
annotation not available
    
 0.883
LOC106607660
Disintegrin and metalloproteinase domain-containing protein 17-like.
    
 0.883
LOC106563469
Putative FERM domain-containing protein FRMD8P1.
     
 0.850
frmd8
FERM domain-containing protein 8 isoform X1.
     
 0.850
LOC106573543
Disintegrin and metalloproteinase domain-containing protein 10-like.
    
 0.724
LOC106561774
Disintegrin and metalloproteinase domain-containing protein 10-like.
    
 0.647
adam10
ADAM metallopeptidase domain 10.
    
 0.647
LOC106587342
Disintegrin and metalloproteinase domain-containing protein 10-like.
    
 0.647
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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