STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106610476Protein sidekick-2-like. (2170 aa)    
Predicted Functional Partners:
MRE11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.536
Mre11
MRE11 homolog, double strand break repair nuclease.
    
 0.536
LOC106609128
Regulator of nonsense transcripts 2-like isoform X3.
     
 0.422
ENSSSAP00000088686
annotation not available
     
 0.422
LOC106588794
Integrin beta; Belongs to the integrin beta chain family.
    
 0.413
ENSSSAP00000055454
annotation not available
    
 0.413
LOC106585011
Inactive tyrosine-protein kinase 7-like; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 
0.409
LOC106564807
Inactive tyrosine-protein kinase 7-like; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 
0.409
PTK7
Inactive tyrosine-protein kinase 7-like; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 
0.409
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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