STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nenfNeudesin isoform X1; Belongs to the cytochrome b5 family. (161 aa)    
Predicted Functional Partners:
papd4
poly(A) RNA polymerase GLD2.
   
 
  0.860
LOC106601271
Uncharacterized protein LOC106601271 isoform X1.
   
 
 0.853
pgrmc2
Membrane-associated progesterone receptor component 2; Belongs to the cytochrome b5 family.
   
 
 0.853
ENSSSAP00000000015
annotation not available
   
 
 0.828
LOC106580350
Selenoprotein M-like.
   
   0.754
pacc1
Transmembrane protein 206 isoform X1.
      
 0.743
znhit2
Zinc finger HIT domain-containing protein 2.
      
 0.739
sumf2
Sulfatase-modifying factor 2 isoform X1.
    
 
 0.726
LOC106612620
serine--tRNA ligase, mitochondrial-like.
    
   0.722
znf622
Zinc finger protein 622 isoform X1.
      
 0.719
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.