STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000010239annotation not available (313 aa)    
Predicted Functional Partners:
sumf2
Sulfatase-modifying factor 2 isoform X1.
      
 0.505
LOC106612307
Uncharacterized protein LOC106612307 isoform X4.
      
 0.475
cmtr1
Cap-specific mRNA (Nucleoside-2'-O-)-methyltransferase 1 isoform X2.
      
 0.432
clec19a
C-type lectin domain family 19 member A.
      
 0.410
CLEC19A
C-type lectin domain family 19 member A-like.
      
 0.410
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.