STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000010239annotation not available (313 aa)    
Predicted Functional Partners:
cmtr1
Cap-specific mRNA (Nucleoside-2'-O-)-methyltransferase 1 isoform X2.
      
 0.508
ccd92
Coiled-coil domain-containing protein 92.
      
 0.474
LOC106585518
Coiled-coil domain-containing protein 92-like.
      
 0.474
them6
Protein THEM6 isoform X1.
      
 0.446
LOC106600423
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
      
 0.437
LOC106569310
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
      
 0.437
LOC106612307
Uncharacterized protein LOC106612307 isoform X4.
      
 0.430
sumf2
Sulfatase-modifying factor 2 isoform X1.
      
 0.429
zmynd12
Zinc finger MYND domain-containing protein 12.
      
 0.427
ENSSSAP00000022566
annotation not available
      
 0.426
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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