Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000010259annotation not available (484 aa)    
Predicted Functional Partners:
armc9
lisH domain-containing protein ARMC9 isoform X1.
    
 
 0.834
ENSSSAP00000025751
annotation not available
     
  0.716
TOP3B
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
     
  0.716
rrp36
Ribosomal RNA processing protein 36 homolog.
      
 0.660
ccdc66
Coiled-coil domain-containing protein 66 isoform X1.
   
 
 0.642
ift140
Intraflagellar transport protein 140 homolog isoform X2.
      
 0.588
lrrc39
Leucine-rich repeat-containing protein 39.
      
 0.574
lrrc2
Leucine-rich repeat-containing protein 2.
      
 0.574
spata48
Uncharacterized protein C7orf72 homolog isoform X1.
      
 0.573
cep41
Centrosomal protein of 41 kDa isoform X1.
      
 0.570
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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