STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000010260Pleckstrin homology, MyTH4 and FERM domain containing H3. (650 aa)    
Predicted Functional Partners:
LOC106561052
Harmonin-like isoform X2.
   
 0.687
LOC106584586
Harmonin-like.
   
 0.687
ENSSSAP00000003483
annotation not available
   
 0.594
LOC106611846
Usher syndrome type-1G protein homolog isoform X1.
   
 0.594
ANKS4B
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.594
LOC106601748-2
Ankyrin repeat and SAM domain-containing protein 4B-like.
   
 0.594
LOC106606395
Usher syndrome type-1G protein homolog.
   
 0.594
LOC106601748
Ankyrin repeat and SAM domain-containing protein 4B-like.
   
 0.594
LOC106589873
Usher syndrome type-1G protein homolog.
   
 0.594
ENSSSAP00000022606
Whirlin a.
    
 0.588
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.