Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106591229Uncharacterized protein LOC106591229. (142 aa)    
Predicted Functional Partners:
cd3e
CD3epsilon isoform 1 precursor.
   
 
  0.585
LOC106565699
H-2 class II histocompatibility antigen, A-U alpha chain-like.
     
  0.576
LOC106567570
HLA class II histocompatibility antigen, DQ beta 1 chain-like.
     
  0.571
LOC106582436
Major histocompatibility complex class I-related gene protein-like isoform X1; Belongs to the MHC class I family.
    
  0.530
LOC106569947
Major histocompatibility complex class I-related gene protein-like; Belongs to the MHC class I family.
    
  0.465
LOC106588401
Class I histocompatibility antigen, F10 alpha chain-like; Belongs to the MHC class I family.
    
  0.465
CD3Z
T-cell surface glycoprotein CD3 zeta chain.
   
 
  0.450
cd3z
T-cell surface glycoprotein CD3 zeta chain.
   
 
  0.450
LOC106564360
H-2 class II histocompatibility antigen, A-Q alpha chain-like.
     
  0.441
LOC106567571
H-2 class II histocompatibility antigen, A-Q alpha chain-like isoform X1.
     
  0.441
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (22%) [HD]