Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANKS4BAnkyrin repeat and sterile alpha motif domain containing 4B. (338 aa)    
Predicted Functional Partners:
LOC106561052
Harmonin-like isoform X2.
   
 0.937
LOC106584586
Harmonin-like.
   
 0.937
ush2a
LOW QUALITY PROTEIN: usherin.
    
 0.584
cdh23
Cadherin-23.
   
 0.575
LOC106579432
Cadherin-23-like isoform X1.
   
 0.575
LOC106603713
Unconventional myosin-VIIa-like isoform X9; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.570
ENSSSAP00000010260
Pleckstrin homology, MyTH4 and FERM domain containing H3.
   
 0.570
LOC106607315
Unconventional myosin-X-like isoform X2.
   
 0.570
LOC106568765
Unconventional myosin-VIIb-like; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.570
LOC106595859
Unconventional myosin-XV-like.
   
 0.570
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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