STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106598390Cilia- and flagella-associated protein 57-like isoform X1. (1221 aa)    
Predicted Functional Partners:
cfap43
Cilia- and flagella-associated protein 43 isoform X1.
   
 
 0.936
lrrc23
Leucine-rich repeat-containing protein 23.
   
 0.934
zmynd12
Zinc finger MYND domain-containing protein 12.
   
 
 0.868
dnali1
Axonemal dynein light intermediate polypeptide 1.
   
 
 0.772
ENSSSAP00000034894
Dynein, axonemal, light intermediate chain 1.
   
 
 0.772
cfap58
Cilia- and flagella-associated protein 58.
  
 0.765
maats1
Protein MAATS1.
   
 
 0.764
ak7
Adenylate kinase 7.
   
   0.762
LOC106571115
Adenylate kinase 7-like isoform X1.
   
   0.762
cfap44
Cilia- and flagella-associated protein 44.
   
  0.758
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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