STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106598390Cilia- and flagella-associated protein 57-like isoform X1. (1221 aa)    
Predicted Functional Partners:
LOC106591572
Coiled-coil domain-containing protein 81-like isoform X2.
   
    0.651
rsph14
Radial spoke head 14 homolog isoform X1.
   
 
 0.570
LOC106609604
Leucine-rich repeat and guanylate kinase domain-containing protein-like.
    
 0.563
tsnaxip1
Translin-associated factor X-interacting protein 1.
   
 0.545
ENSSSAP00000024395
annotation not available
   
  0.527
ENSSSAP00000028539
annotation not available
   
  0.527
ENSSSAP00000086728
annotation not available
   
  0.527
ENSSSAP00000092802
annotation not available
   
  0.527
ENSSSAP00000103215
annotation not available
   
  0.527
cfap74
Cilia- and flagella-associated protein 74 isoform X2.
    
 
 0.519
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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