Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC106605783Cytoplasmic phosphatidylinositol transfer protein 1-like isoform X1. (283 aa)    
Predicted Functional Partners:
agtrap
Type-1 angiotensin II receptor-associated protein isoform X3.
    
 
 0.663
atrap
Type-1 angiotensin II receptor-associated protein-like.
    
 
 0.663
CATSPER2
Cation channel sperm-associated protein 2 isoform X2.
      
 0.543
dolk
Dolichol kinase isoform X1.
    
 0.521
LOC106585679
Probable helicase with zinc finger domain isoform X3.
     
 0.493
HELZ
Helicase with zinc finger.
     
 0.493
LOC106578663
Protein CDV3 homolog.
   
  
 0.457
LOC106581856
Mitochondrial Chaperone BCS1; Belongs to the AAA ATPase family.
   
 
 0.440
emp3
Epithelial membrane protein 3 isoform X1.
      
 0.438
LOC106611341
Intersectin-2-like.
     
 0.435
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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