STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106610563Cdc42 effector protein 4-like. (344 aa)    
Predicted Functional Partners:
rhoq
Rho-related GTP-binding protein RhoQ isoform X1.
    
 0.683
rhoh
Rho-related GTP-binding protein RhoH.
    
 0.683
rhoq-2
Rho-related GTP-binding protein RhoQ.
    
 0.683
LOC106567263
Cell division control protein 42 homolog isoform X2.
    
 0.680
LOC106565619
Cell division control protein 42 homolog isoform X1.
    
 0.680
LOC106572399
Cell division control protein 42 homolog isoform X1.
    
 0.680
LOC106583122
Cell division control protein 42 homolog isoform X1.
    
 0.680
LOC106605262
Septin-7 isoform X2; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
    
 0.663
LOC106560914
Septin-7-like isoform X1; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
    
 0.663
LOC106582140
Septin-7-like; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
    
 0.663
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.