STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106610551Peripheral myelin protein 22-like. (236 aa)    
Predicted Functional Partners:
wdr90
WD repeat-containing protein 90.
    
   0.615
cfap126
Protein Flattop; Acts as a regulator of cilium basal body docking and positioning in mono- and multiciliated cells. Belongs to the Flattop family.
   
 
 0.591
LOC106582056
EF-hand domain-containing family member B-like isoform X2.
   
   0.520
LOC106566715
Sperm-associated antigen 8-like.
   
   0.517
cssa13h1orf194
Uncharacterized protein C1orf194 homolog.
   
   0.514
LOC106600490
Myelin protein P0-like isoform X1.
      
 0.506
ENSSSAP00000017985
annotation not available
   
   0.505
LOC106570807
Uncharacterized protein C9orf135-like isoform X1.
   
   0.491
efhc1
EF-hand domain-containing protein 1 isoform X1.
   
 
 0.459
efhc2
EF-hand domain-containing family member C2 isoform X1.
   
 
 0.459
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.