STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106605271Phosphoinositide phospholipase C. (1109 aa)    
Predicted Functional Partners:
ENSSSAP00000013564
annotation not available
   
 0.552
hcrtr2
Orexin receptor type 2; Belongs to the G-protein coupled receptor 1 family.
   
 0.552
plcb4
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.
   
 
0.483
ENSSSAP00000098778
annotation not available
   
 
0.483
LOC106586001
Doublesex- and mab-3-related transcription factor 1-like.
   
  
 0.461
ENSSSAP00000024395
annotation not available
   
 
  0.435
ENSSSAP00000028539
annotation not available
   
 
  0.435
ENSSSAP00000086728
annotation not available
   
 
  0.435
ENSSSAP00000092802
annotation not available
   
 
  0.435
ENSSSAP00000103215
annotation not available
   
 
  0.435
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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