STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPR108Protein GPR108-like. (706 aa)    
Predicted Functional Partners:
LOC106611600
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3.
    
   0.489
LOC106604555
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3.
    
   0.489
LOC106588229
Solute carrier family 52, riboflavin transporter, member 2.
      
 0.439
tpra1
Transmembrane protein adipocyte-associated 1 isoform X1.
   
  
 0.438
g137a
Integral membrane protein GPR137 isoform X1.
      
 0.430
LOC106610616
Integral membrane protein GPR137B-like isoform X1.
      
 0.410
LOC106602981
Integral membrane protein GPR137B-like.
      
 0.410
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.