Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FMN1Formin-like isoform X1. (1353 aa)    
Predicted Functional Partners:
ENSSSAP00000004990
Si:ch211-175f11.5.
    
 0.830
LOC106566817
Ephrin type-B receptor 2-like isoform X2.
    
 0.755
LOC106572237
Ephrin type-B receptor 2-like isoform X3.
    
 0.755
arl16
ADP-ribosylation factor-like protein 16.
    
 0.729
LOC106567631
Interferon regulatory factor 2-binding protein 1-like.
      
 0.720
LOC106612697
Interferon regulatory factor 2-binding protein 1-like.
      
 0.720
LOC106580746
Interferon regulatory factor 2-binding protein 1-like.
      
 0.720
LOC106581140
Dual specificity tyrosine-phosphorylation-regulated kinase 1A-like isoform X1.
      
 0.719
LOC106613008
Dual specificity tyrosine-phosphorylation-regulated kinase 1A-like isoform X1.
      
 0.719
LOC106589490
Dual specificity mitogen-activated protein kinase kinase 4-like isoform X1; Belongs to the protein kinase superfamily.
      
 0.683
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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