STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106605788Zinc finger and BTB domain-containing protein 7B-like isoform X1. (594 aa)    
Predicted Functional Partners:
LOC106579491
Runt-related transcription factor.
    
 0.460
LOC106610817
Runt-related transcription factor.
    
 0.460
PCF11
Pre-mRNA cleavage complex 2 protein Pcf11.
     
 0.416
hdac1
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.401
LOC106570688
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.401
hdac2
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.401
LOC106610811
Probable histone deacetylase 1-B.
    
 0.401
LOC106589072
Probable histone deacetylase 1-B.
    
 0.401
hdac8
Histone deacetylase 8 isoform X3.
    
 0.401
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.