STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106563533Tetraspanin. (241 aa)    
Predicted Functional Partners:
LOC106561241
Tetraspanin.
  
 
 
0.798
LOC106573420
Tetraspanin.
  
 
 
0.789
LOC106575514
Prostaglandin F2 receptor negative regulator-like.
    
 
 0.777
ENSSSAP00000115182
Si:ch211-132g1.7.
    
 
 0.777
igsf8
Immunoglobulin superfamily member 8.
    
 
 0.627
LOC106572544
C4b-binding protein alpha chain-like isoform X1.
    
 0.610
LOC106572353
Complement factor H-like.
    
 0.610
LOC106570128
Apolipoprotein Eb-like.
   
  
 0.601
LOC106598850
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.594
cd63
Tetraspanin.
    
 
0.557
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.