Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC106611870Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1-like. (891 aa)    
Predicted Functional Partners:
glce
D-glucuronyl C5-epimerase.
   
 0.948
LOC106606834
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2-like.
     
  0.796
LOC106576965
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2-like.
     
  0.796
EXT2
Exostosin-2; Belongs to the glycosyltransferase 47 family.
    
 
 0.638
LOC106571235
Syndecan-1-like.
     
 0.615
gpc2
Glypican-2 isoform X2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.567
LOC106586057
Glypican-6-like isoform X2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.567
LOC106575831
Glypican-6-like; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.567
LOC106582440
Glypican-6-like isoform X1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.567
LOC106612107
Glypican-4-like isoform X2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.567
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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