STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106605250Rano class II histocompatibility antigen, B alpha chain-like. (201 aa)    
Predicted Functional Partners:
rs14
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.800
LOC106611871
HLA class II histocompatibility antigen gamma chain-like.
   
 0.800
LOC100194652
Salmo salar ribosomal protein S14-2 (LOC100194652), mRNA.
   
 0.800
ENSSSAP00000071161
annotation not available
   
  0.762
ENSSSAP00000113470
annotation not available
   
  0.762
LOC106564360
H-2 class II histocompatibility antigen, A-Q alpha chain-like.
  
 
0.754
LOC106567571
H-2 class II histocompatibility antigen, A-Q alpha chain-like isoform X1.
  
 
0.743
mrps11
28S ribosomal protein S11, mitochondrial isoform X1; Belongs to the universal ribosomal protein uS11 family.
   
 0.710
LOC106603941
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
    
 
 0.634
LOC106612054
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
    
 
 0.634
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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