STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000010482annotation not available (289 aa)    
Predicted Functional Partners:
aqr
Intron-binding protein aquarius.
    
 0.974
LOC106566276
LOW QUALITY PROTEIN: pre-mRNA-splicing factor ISY1 homolog.
   
 0.969
PPIE
Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.
   
 0.968
LOC106571265
Crooked neck-like protein 1.
   
 0.958
LOC106607683
Crooked neck-like protein 1.
   
 0.958
bud31
Protein BUD31 homolog.
   
 0.955
LOC106595689
Protein BUD31 homolog.
   
 0.955
LOC106607544
pre-mRNA-splicing factor SYF1-like.
   
 0.950
syf1
Salmo salar Pre-mRNA-splicing factor SYF1 (syf1), mRNA.
   
 0.950
snw1
LOW QUALITY PROTEIN: SNW domain-containing protein 1.
   
 0.943
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.