STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106568846Paired box protein Pax-3-like isoform X2. (501 aa)    
Predicted Functional Partners:
LOC106603512
Mitochondrial import inner membrane translocase subunit Tim22-like isoform X1.
    
 0.785
LOC106567977
Mitochondrial import inner membrane translocase subunit Tim22-like.
    
 0.785
timm10
Mitochondrial import inner membrane translocase subunit Tim10.
   
 0.702
ENSSSAP00000034099
annotation not available
   
 0.702
timm9
Mitochondrial import inner membrane translocase subunit Tim9.
   
 
 0.671
ENSSSAP00000091774
annotation not available
   
 
 0.671
cisd2
CDGSH iron-sulfur domain-containing protein 2B; Regulator of autophagy that contributes to antagonize becn1- mediated cellular autophagy at the endoplasmic reticulum. Participates in the interaction of bcl2 with becn1 and is required for bcl2-mediated depression of endoplasmic reticulum Ca(2+) stores during autophagy (By similarity); Belongs to the CISD protein family. CISD2 subfamily.
    
 0.628
LOC106569522
Cactin-like isoform X1.
    
 0.628
LOC106600017
Cactin-like.
    
 0.628
LOC106612556
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.
    
 0.623
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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