STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106595161Histone deacetylase 9-B-like. (480 aa)    
Predicted Functional Partners:
LOC106590004
AT-rich interactive domain-containing protein 4B-like.
    
 0.903
LOC106578775
AT-rich interactive domain-containing protein 4B-like isoform X1.
    
 0.903
arid4a
AT-rich interactive domain-containing protein 4A.
    
 0.903
LOC106611238
AT-rich interactive domain-containing protein 4A-like isoform X4.
    
 0.903
ENSSSAP00000103251
AT-rich interactive domain-containing protein 4B-like.
    
 0.903
ENSSSAP00000028410
annotation not available
     
 0.753
LOC106562992
polyubiquitin-B.
   
 0.747
LOC106563918
Nuclear pore complex protein Nup155-like isoform X1.
   
 0.717
LOC106587828
Paired amphipathic helix protein Sin3a-like.
   
 0.710
sin3a
Paired amphipathic helix protein Sin3a isoform X3.
   
 0.710
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.