STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106603326SH3 domain-binding glutamic acid-rich-like protein; Belongs to the SH3BGR family. (108 aa)    
Predicted Functional Partners:
LOC106561403
Selenoprotein O-like.
   
    0.560
LOC106590304
UPF0061 protein Tbd_1019-like isoform X2.
   
    0.560
LOC106603323
MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
      
 0.559
LOC106609549
Selenoprotein O-like isoform X1.
   
    0.467
LOC106576377
Selenoprotein O-like.
   
    0.467
LOC106579099
RBR-type E3 ubiquitin transferase.
      
 0.443
LOC106605544
RBR-type E3 ubiquitin transferase.
      
 0.443
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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