STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106609626Rho GTPase-activating protein 17-like. (886 aa)    
Predicted Functional Partners:
LOC106581427
Angiomotin-like protein 1 isoform X2.
    
 0.917
LOC106568021
Angiomotin-like isoform X2.
    
 0.889
LOC106603473
Angiomotin-like isoform X1.
    
 0.889
LOC106567263
Cell division control protein 42 homolog isoform X2.
   
 0.814
LOC106565619
Cell division control protein 42 homolog isoform X1.
   
 0.814
LOC106572399
Cell division control protein 42 homolog isoform X1.
   
 0.814
LOC106583122
Cell division control protein 42 homolog isoform X1.
   
 0.814
LOC106576553
Cell division control protein 42 homolog.
   
 0.795
LOC106576553-2
Cell division control protein 42 homolog.
   
 0.795
LOC106588426
Cell division control protein 42 homolog isoform X1.
   
 0.795
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.