STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ap5s1AP-5 complex subunit sigma-1. (200 aa)    
Predicted Functional Partners:
ap5m1
AP-5 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
 
 0.791
K0415
K0415 protein.
    
 0.741
spg11
Spatacsin isoform X2.
    
 
 0.622
LOC106612071
Zinc finger and BTB domain-containing protein 3-like.
      
 0.601
LOC106585186
Zinc finger protein 367-like isoform X2.
      
 0.601
LOC106604372
Zinc finger and BTB domain-containing protein 3-like.
      
 0.601
znf367
Zinc finger protein 367.
      
 0.601
ap4e1
AP-4 complex subunit epsilon-1 isoform X2.
     
 0.600
ENSSSAP00000034592
SH3 domain and tetratricopeptide repeats 2.
      
 0.599
sh3tc2
SH3 domain and tetratricopeptide repeat-containing protein 2.
      
 0.599
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.