STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106609817Coiled-coil domain-containing protein 146-like. (231 aa)    
Predicted Functional Partners:
ENSSSAP00000042990
annotation not available
    
 0.767
ccdc113
Coiled-coil domain-containing protein 113 isoform X2.
  
  
 0.654
tsnaxip1
Translin-associated factor X-interacting protein 1.
   
 0.641
LOC106584861
Uncharacterized protein C15orf26 homolog.
   
 
 0.632
dlec1
Deleted in lung and esophageal cancer protein 1 isoform X2.
    
 0.617
lrrc23
Leucine-rich repeat-containing protein 23.
    
 0.604
rsph14
Radial spoke head 14 homolog isoform X1.
      
 0.600
lrrc34
Leucine-rich repeat-containing protein 34.
      
 0.597
cfap74
Cilia- and flagella-associated protein 74 isoform X2.
      
 0.595
ccdc65
Coiled-coil domain-containing protein 65.
      
 0.592
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.