STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106611431Homeobox protein B-H2-like. (405 aa)    
Predicted Functional Partners:
LOC106570244
Brachyury protein homolog A-like.
    
 0.710
LOC106588610
Brachyury protein homolog A.
    
 0.710
ENSSSAP00000019940
annotation not available
   
  
 0.603
LOC106614011
Uncharacterized protein LOC106614011.
   
  
 0.603
LOC106575777
T-box transcription factor TBX19-like.
    
 0.575
TBXT
LOW QUALITY PROTEIN: brachyury protein.
    
 0.575
LOC106589941
Brachyury protein-like.
    
 0.575
LOC106589941-2
Brachyury protein-like.
    
 0.575
foxa2
Hepatocyte nuclear factor 3-beta.
    
 0.522
LOC106571241
Forkhead box protein A2-like.
    
 0.522
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.