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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANGPTL3Angiopoietin-related protein 3-like isoform X1. (483 aa)    
Predicted Functional Partners:
ENSSSAP00000078840
Si:dkey-114l24.2.
    
 0.661
LOC106577761
Serine protease hepsin-like.
   
 0.579
LOC106605629
Serine protease hepsin-like; Belongs to the peptidase S1 family.
   
 0.579
LOC106611125
Apolipoprotein B-100-like.
   
  
 0.570
LOC106572549
Tyrosine-protein kinase STYK1-like isoform X1.
    
 0.541
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.534
LOC100136579
Apolipoprotein B-100 isoform X1.
   
  
 0.458
antithrombin
Antithrombin protein precursor; Belongs to the serpin family.
   
 
 0.450
LOC106613587
antithrombin-III-like; Belongs to the serpin family.
   
 
 0.450
LOC106567727
Zinc finger and BTB domain-containing protein 16-A-like isoform X1.
    
 0.442
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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