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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000010607Defensin, beta-like 2. (63 aa)    
Predicted Functional Partners:
ENSSSAP00000088430
annotation not available
  
     0.523
LOC106588212
Prostate stem cell antigen-like.
  
     0.521
LOC106598340
Uncharacterized protein LOC106598340.
  
     0.508
LOC106568711
Uncharacterized protein LOC106568711.
  
     0.501
LOC106584559
Sperm acrosome membrane-associated protein 4-like.
  
     0.487
LOC106605240
Sperm acrosome membrane-associated protein 4-like.
  
     0.486
ENSSSAP00000076321
Si:dkey-165a24.9.
  
     0.482
LOC106609213
Uncharacterized protein LOC106609213 isoform X1.
  
     0.477
LOC106576078
Uncharacterized protein LOC106576078.
  
     0.466
LOC106608727
G-protein coupled receptor 4-like; Belongs to the G-protein coupled receptor 1 family.
  
     0.461
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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