STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106602742FH2 domain-containing protein 1-like. (1239 aa)    
Predicted Functional Partners:
ENSSSAP00000004990
Si:ch211-175f11.5.
    
 0.818
pfn2
Profilin; Belongs to the profilin family.
    
 0.610
PROF2
Profilin; Belongs to the profilin family.
    
 0.610
PFN3
Profilin; Belongs to the profilin family.
    
 0.610
LOC106568739
Profilin; Belongs to the profilin family.
    
 0.610
LOC106613487
Profilin; Belongs to the profilin family.
    
 0.610
LOC106560912
Actin-binding protein anillin-like isoform X5.
   
 0.604
ANLN
Actin-binding protein anillin-like isoform X1.
   
 0.604
suox
Sulfite oxidase, mitochondrial isoform X2.
      
 0.601
rhof
Rho-related GTP-binding protein RhoF isoform X1.
    
 0.595
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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