STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106606223Xylosyltransferase 1-like. (732 aa)    
Predicted Functional Partners:
b4galt7
Beta-1,4-galactosyltransferase 7 isoform X5.
     
 0.939
LOC106601414
Xylosyltransferase 2-like isoform X1.
  
  
 
0.902
LOC106588898
Xylosyltransferase 1-like.
  
  
 
0.901
LOC106571235
Syndecan-1-like.
    
 0.790
LOC106613959
Glycosaminoglycan xylosylkinase isoform X1.
      
 0.511
LOC106584281
Glycosaminoglycan xylosylkinase-like.
      
 0.511
LOC106582650
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.504
LOC106565017
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.504
glce
D-glucuronyl C5-epimerase.
      
 0.485
b3gat3
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
      
 0.476
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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