rgs14 protein (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

rgs14

Regulator of G-protein signalling 14 isoform X1. (537 aa)

Predicted Functional Partners:

LOC106573931

0.605

apc2

0.605

apc

0.605

LOC106568367

0.605

LOC106587002

0.566

LOC106565973

0.566

LOC106563272-2

0.566

LOC106563272

0.566

GNAT2

0.557

LOC106566369

0.557

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GNAT2	LOC106563272	ENSSSAP00000023669	ENSSSAP00000057687	Guanine nucleotide-binding protein G(T) subunit alpha-2-like isoform X1.	Regulator of G-protein signaling 3-like isoform X4.	0.603
GNAT2	LOC106563272-2	ENSSSAP00000023669	ENSSSAP00000057673	Guanine nucleotide-binding protein G(T) subunit alpha-2-like isoform X1.	Regulator of G-protein signaling 3-like isoform X1.	0.603
GNAT2	LOC106565973	ENSSSAP00000023669	ENSSSAP00000036376	Guanine nucleotide-binding protein G(T) subunit alpha-2-like isoform X1.	Regulator of G-protein signaling 3-like isoform X3.	0.603
GNAT2	LOC106587002	ENSSSAP00000023669	ENSSSAP00000034413	Guanine nucleotide-binding protein G(T) subunit alpha-2-like isoform X1.	Regulator of G-protein signaling 3-like isoform X1.	0.603
GNAT2	rgs14	ENSSSAP00000023669	ENSSSAP00000010636	Guanine nucleotide-binding protein G(T) subunit alpha-2-like isoform X1.	Regulator of G-protein signalling 14 isoform X1.	0.557
LOC106563272	GNAT2	ENSSSAP00000057687	ENSSSAP00000023669	Regulator of G-protein signaling 3-like isoform X4.	Guanine nucleotide-binding protein G(T) subunit alpha-2-like isoform X1.	0.603
LOC106563272	LOC106566369	ENSSSAP00000057687	ENSSSAP00000032080	Regulator of G-protein signaling 3-like isoform X4.	Guanine nucleotide-binding protein G(T) subunit alpha-2-like.	0.603
LOC106563272	LOC106568367	ENSSSAP00000057687	ENSSSAP00000108862	Regulator of G-protein signaling 3-like isoform X4.	Adenomatous polyposis coli protein-like isoform X1.	0.552
LOC106563272	LOC106573931	ENSSSAP00000057687	ENSSSAP00000012505	Regulator of G-protein signaling 3-like isoform X4.	Adenomatous polyposis coli protein 2-like.	0.552
LOC106563272	apc	ENSSSAP00000057687	ENSSSAP00000060771	Regulator of G-protein signaling 3-like isoform X4.	Adenomatous polyposis coli protein isoform X1.	0.552
LOC106563272	apc2	ENSSSAP00000057687	ENSSSAP00000046055	Regulator of G-protein signaling 3-like isoform X4.	Adenomatous polyposis coli protein 2.	0.552
LOC106563272	rgs14	ENSSSAP00000057687	ENSSSAP00000010636	Regulator of G-protein signaling 3-like isoform X4.	Regulator of G-protein signalling 14 isoform X1.	0.566
LOC106563272-2	GNAT2	ENSSSAP00000057673	ENSSSAP00000023669	Regulator of G-protein signaling 3-like isoform X1.	Guanine nucleotide-binding protein G(T) subunit alpha-2-like isoform X1.	0.603
LOC106563272-2	LOC106566369	ENSSSAP00000057673	ENSSSAP00000032080	Regulator of G-protein signaling 3-like isoform X1.	Guanine nucleotide-binding protein G(T) subunit alpha-2-like.	0.603
LOC106563272-2	LOC106568367	ENSSSAP00000057673	ENSSSAP00000108862	Regulator of G-protein signaling 3-like isoform X1.	Adenomatous polyposis coli protein-like isoform X1.	0.552
LOC106563272-2	LOC106573931	ENSSSAP00000057673	ENSSSAP00000012505	Regulator of G-protein signaling 3-like isoform X1.	Adenomatous polyposis coli protein 2-like.	0.552
LOC106563272-2	apc	ENSSSAP00000057673	ENSSSAP00000060771	Regulator of G-protein signaling 3-like isoform X1.	Adenomatous polyposis coli protein isoform X1.	0.552
LOC106563272-2	apc2	ENSSSAP00000057673	ENSSSAP00000046055	Regulator of G-protein signaling 3-like isoform X1.	Adenomatous polyposis coli protein 2.	0.552
LOC106563272-2	rgs14	ENSSSAP00000057673	ENSSSAP00000010636	Regulator of G-protein signaling 3-like isoform X1.	Regulator of G-protein signalling 14 isoform X1.	0.566
LOC106565973	GNAT2	ENSSSAP00000036376	ENSSSAP00000023669	Regulator of G-protein signaling 3-like isoform X3.	Guanine nucleotide-binding protein G(T) subunit alpha-2-like isoform X1.	0.603