STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106603094Sialidase-3-like isoform X1. (407 aa)    
Predicted Functional Partners:
arsa
Arylsulfatase A.
  
 0.941
gla
Alpha-galactosidase.
     
 0.901
LOC106568260
Galactosylceramide sulfotransferase-like isoform X1.
    
  0.655
LOC106607044
galactose-3-O-sulfotransferase 2-like isoform X1.
     
  0.650
LOC106580113
Galactosylceramide sulfotransferase-like.
     
  0.650
LOC106585654
Galactosylceramide sulfotransferase-like.
     
  0.650
ift52
Intraflagellar transport protein 52 homolog.
    
 0.561
ift57
Intraflagellar transport protein 57 homolog isoform X1.
    
 0.548
ift80
LOW QUALITY PROTEIN: intraflagellar transport protein 80 homolog.
    
 0.547
ift172
Intraflagellar transport protein 172 homolog.
    
 0.543
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.