Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC106603094Sialidase-3-like isoform X1. (407 aa)    
Predicted Functional Partners:
arsa
Arylsulfatase A.
  
 0.964
st3gal5
Lactosylceramide alpha-2,3-sialyltransferase; Belongs to the glycosyltransferase 29 family.
     
 0.937
LOC106572659
Beta-1,4 N-acetylgalactosaminyltransferase 1-like.
     
 0.935
LOC106566571
Beta-1,4-galactosyltransferase 5-like.
     
 0.929
gla
Alpha-galactosidase.
     
 0.923
LOC106570060
Sialidase-1-like.
  
  
0.905
LOC106588520
Sialidase-1-like.
  
  
0.904
LOC106607044
galactose-3-O-sulfotransferase 2-like isoform X1.
     
  0.902
b4gn1
Beta-1,4 N-acetylgalactosaminyltransferase.
     
 0.888
B4GALNT1
Beta-1,4 N-acetylgalactosaminyltransferase.
     
 0.888
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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