STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106563492Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (374 aa)    
Predicted Functional Partners:
mk13
Mitogen-activated protein kinase.
   
 0.920
LOC106561402
Mitogen-activated protein kinase.
   
 0.889
LOC106576243
Mitogen-activated protein kinase.
   
 0.889
LOC106573286
Mitogen-activated protein kinase.
   
 0.889
p38a
Mitogen-activated protein kinase.
   
 0.869
p38b
Mitogen-activated protein kinase.
   
 0.869
MAPK11
Mitogen-activated protein kinase.
   
 0.859
LOC106560362
Mitogen-activated protein kinase.
   
 0.837
mapk8
Mitogen-activated protein kinase.
   
 0.837
mapk10
Mitogen-activated protein kinase.
   
 0.837
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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