STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106564249UPF0390 protein zgc136864-like. (130 aa)    
Predicted Functional Partners:
LOC106564948
Proteasome subunit beta type-3-like.
   
    0.592
LOC106587952
Proteasome subunit beta.
   
    0.592
LOC106580476
Dual specificity protein phosphatase 2-like.
  
     0.530
ENSSSAP00000010395
annotation not available
  
     0.485
cc124
Coiled-coil domain-containing protein 124 isoform X1.
   
  
 0.479
CCDC124
Coiled-coil domain-containing protein 124-like.
   
  
 0.479
LOC106606599
Retinoic acid-induced protein 1-like.
  
     0.473
LOC106586898
Uncharacterized protein LOC106586898.
  
     0.467
ox2g
OX-2 membrane glycoprotein isoform X1.
  
     0.456
LOC100194683
Uncharacterized protein LOC100194683.
  
     0.454
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.