STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106564253Nanos homolog 3-like; Belongs to the nanos family. (214 aa)    
Predicted Functional Partners:
ENSSSAP00000071560
annotation not available
   
 
 0.603
dnd1
Dead end.
    
 
 0.599
piwil1
Piwi-like protein 1; Belongs to the argonaute family.
   
 
 0.598
LOC106561350
CCR4-NOT transcription complex subunit 1-like isoform X11.
    
 
 0.561
ENSSSAP00000080004
CCR4-NOT transcription complex, subunit 1.
    
 
 0.561
figla
Factor in the germline alpha.
      
 0.560
LOC106604233
Growth/differentiation factor 9-like isoform X1.
   
  
 0.518
GDF9
Growth/differentiation factor 9-like.
   
  
 0.518
LOC106578107
Bone morphogenetic protein 15-like.
   
  
 0.498
LOC106591667
Nuclear receptor subfamily 0 group B member 1-like.
      
 0.473
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (18%) [HD]