STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106612492Tetratricopeptide repeat protein 9B-like. (217 aa)    
Predicted Functional Partners:
hs90b
Heat shock protein HSP 90-beta isoform X1.
   
 0.675
tsc1
Hamartin isoform X2.
   
 0.675
hsp90ab1
Heat shock protein HSP 90-beta.
   
 0.675
LOC106608136
Heat shock protein HSP 90-alpha-like.
   
 0.675
trap1
Heat shock protein 75 kDa, mitochondrial.
   
 0.675
LOC106565454
Hamartin-like.
   
 0.675
hs90a
Heat shock protein HSP 90-alpha 1-like.
   
 0.675
LOC100380649
Hamartin isoform X3.
   
 0.675
LOC106583560
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 0.658
LOC106565501
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 0.658
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.