STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106613842Protein ENL-like isoform X1. (586 aa)    
Predicted Functional Partners:
cdk9
Cyclin-dependent kinase 9 isoform X1; Belongs to the protein kinase superfamily.
    
 0.940
dmap1
DNA methyltransferase 1-associated protein 1 isoform X2.
   
 0.905
LOC106603851
AF4/FMR2 family member 4-like isoform X1.
    
 0.890
LOC106567500
AF4/FMR2 family member 4-like isoform X1.
    
 0.890
EAF1
ELL-associated factor 1-like isoform X2.
   
 0.863
LOC106605353
ELL-associated factor 1-like isoform X2.
   
 0.863
polr2c
DNA-directed RNA polymerase II subunit RPB3.
   
 0.862
ENSSSAP00000034961
Polymerase (RNA) II (DNA directed) polypeptide C.
   
 0.862
ENSSSAP00000000977
annotation not available
   
 0.841
gtf2f1
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.841
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.