STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
duldaSerine/threonine-protein phosphatase dullard-A. (248 aa)    
Predicted Functional Partners:
TM188
Transmembrane protein 188.
   
 0.886
LOC106565215
Phosphatidate phosphatase LPIN2-like isoform X1.
    
 0.836
LOC106570052
Phosphatidate phosphatase LPIN1-like isoform X1.
    
 0.836
LOC106610734
Phosphatidate phosphatase LPIN1-like isoform X5.
    
 0.836
LOC106583597
Phosphatidate phosphatase LPIN2-like.
    
 0.836
LPIN2
Phosphatidate phosphatase LPIN2-like isoform X1.
    
 0.836
LPIN2-2
Phosphatidate phosphatase LPIN2-like isoform X2.
    
 0.836
ENSSSAP00000000977
annotation not available
   
 0.825
gtf2f1
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.825
LOC106604162
DNA-directed RNA polymerase II subunit RPB7-like.
    
 0.715
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.