STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acer1Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (275 aa)    
Predicted Functional Partners:
asah2
Neutral ceramidase.
    
 0.960
LOC106602555
Acid ceramidase-like.
     
 0.953
LOC106572704
Ceramide kinase-like isoform X2.
    
 0.944
LOC106567014
Ceramide kinase-like.
    
 0.944
LOC106575992
Ceramide kinase-like.
    
 0.944
CERK
Ceramide kinase.
    
 0.944
gba2
Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.
     
 0.939
LOC106568572
Ceramide glucosyltransferase-like.
     
 0.939
LOC106606739
Sphingolipid delta(4)-desaturase DES1-like.
   
 
 0.933
LOC106576957
Sphingolipid delta(4)-desaturase DES1-like.
   
 
 0.933
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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