Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
chrdl2Chordin-like protein 2. (449 aa)    
Predicted Functional Partners:
LOC106609787
Extracellular serine/threonine protein kinase FAM20C-like.
    
  0.679
LOC106589575
Extracellular serine/threonine protein kinase FAM20C-like.
    
  0.679
LOC106607519
Extracellular serine/threonine protein kinase FAM20C-like.
    
  0.600
FAM20A
Protein FAM20A-like.
     
 0.592
fam20a
Pseudokinase FAM20A isoform X1.
     
 0.592
LOC106611121
Bone morphogenetic protein 4-like.
    
 0.589
LOC106612383
Bone morphogenetic protein 2-like isoform X1.
    
 0.589
bmp4
Bone morphogenetic protein 4 precursor.
    
 0.589
bmp2
Bone morphogenetic protein 2 precursor.
    
 0.589
LOC106571739
Bone morphogenetic protein 2-like.
    
 0.589
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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