Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sipa1l3Signal-induced proliferation-associated 1-like protein 3 isoform X2. (1675 aa)    
Predicted Functional Partners:
ap5b1
AP-5 complex subunit beta-1 isoform X2.
      
 0.712
AFDN
Afadin-like isoform X5.
    
 0.610
LOC106603236
Afadin-like.
    
 0.610
mllt4
Afadin isoform X1.
    
 0.610
LOC106572472
Ras-related protein Rap-1A-like.
    
 0.600
LOC106567206
Ras-related protein O-Krev isoform X1.
    
 0.600
LOC106582744
Ras-related protein Rap-1A-like.
    
 0.600
LOC106566052
Ras-related protein Rap-1A-like.
    
 0.600
LOC106585182
Leucine zipper putative tumor suppressor 3-like isoform X1.
    
 
 0.587
LOC106563299
Suppressor APC domain-containing protein 2-like isoform X1.
      
 0.552
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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